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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015874034.1_cds_XP_016435365.1_31332
CDS Infomation

[gene=LOC107761635] [db_xref=GeneID:107761635] [protein=phytochromobilin:ferredoxin oxidoreductase, chloroplastic-like] [protein_id=XP_016435365.1] [location=complement(join(20239..20424,20515..20565,21794..21898,22071..22202,22322..22415,24301..24395,24478..24597,26625..26882))] [gbkey=CDS]
Sequence

ATGGAGTGTCTACTCCCAACCCCTTTTTCATTTTCTTCTTCTTTTTCCTCACCAAGCTGG
TTTTCTCCATTTCTAGTACTAAAAAATAGTAGTAAACTTGGTTTCAACAGAAAATTATGT
AGCTTTAACAGAAATGGAAGTAGGTCCACGAGTATGAGTCATGAAATGGAAAGCTCTGTT
TTTTCTTACAAGAAGTTGATTCACTTTGCTTTAGAAGAAACCAACTCACATACCCAATTT
GTCCCTTCTCCATTACAGGAGAAATACAGCTCTTTGTTGGCCATGGATGACGAAACGGAG
CTACAGATGCTGTCTTTTGAAGCCCCTAAAATTCGACTTCTTCGCAGTTTGTGTATTGAA
GGGAGCGACGGCATGCAGGTATTGGATTTTGCTGCATTCCCAAAACCGGAATTTGATCTG
CCTATCTTCTGTGCGAACTTTTTCACTGCTGCTAAGATGAACATAATTGTACTGGACCTT
AACCCATTGCATGATGTCATGGATCAAGAAGATTACAAAGAGAAGTACTATAAAGGCTTG
ATTCCTTTAGGCCTCAAGTATTCTGAGCTTTTACCCTGGGGAGGGAAGCTCACCAGCGAG
TCTCTGAAATTCTTTTCCCCAATAGTCATATGGACGAGATTCTCATCTAGCCCATACAAC
CATTCAGTTCTGTTTTCTGCATTCAAGGATTATTACAAGGCATGGCTTGAGCTAATGGAC
AGATCAGAAGAGGAAACTGATGCTTCTCAAGTTGATCGCAATCGCGAAGCTCAGCATAGA
TACTTGACATGGAGAGCAGAAAAAGATCCAGGTCATGGAGTTTTGAAAAGACTGGTAGGG
GAAGCTCTTGCCAAGGATGTGATTAGTGAATTCCTATTCAATGGTGTTAACAAGCTTGGT
AGCAAAACATTTCTTGATTACTTTCCAGAGTACAGATGTGAAGATGGTAGAGTAAACGAA
AAGCGCAGCATGATTGGAAAATCATTTGAAAGTCGACCTTGGAATGCAAGAGGAGAATTC
ATAGGTAATAGGGTTAGCTAG

Peptide Sequence

PEP ID

XP_016435365.1
PEP Infomation

PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic-like [Nicotiana tabacum]
Sequence

MECLLPTPFSFSSSFSSPSWFSPFLVLKNSSKLGFNRKLCSFNRNGSRSTSMSHEMESSV
FSYKKLIHFALEETNSHTQFVPSPLQEKYSSLLAMDDETELQMLSFEAPKIRLLRSLCIE
GSDGMQVLDFAAFPKPEFDLPIFCANFFTAAKMNIIVLDLNPLHDVMDQEDYKEKYYKGL
IPLGLKYSELLPWGGKLTSESLKFFSPIVIWTRFSSSPYNHSVLFSAFKDYYKAWLELMD
RSEEETDASQVDRNREAQHRYLTWRAEKDPGHGVLKRLVGEALAKDVISEFLFNGVNKLG
SKTFLDYFPEYRCEDGRVNEKRSMIGKSFESRPWNARGEFIGNRVS

Transcript Sequence

Gene sequence data has not been registered.